STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107806112Filament-like plant protein 7. (1000 aa)    
Predicted Functional Partners:
LOC107782074
Dihydroxy-acid dehydratase, chloroplastic-like.
  
 
 0.887
LOC107787836
Dihydroxy-acid dehydratase, chloroplastic-like.
  
 
 0.887
LOC107760060
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
  
 0.879
LOC107784121
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
  
 0.879
LOC107781243
Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-like.
  
 0.776
LOC107782843
Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial.
  
 0.776
LOC107804365
Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-like.
  
 0.776
LOC107806214
Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-like isoform X2.
  
 0.776
LOC107813330
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.776
LOC107814521
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.776
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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