STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107806298Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family. (325 aa)    
Predicted Functional Partners:
LOC107779000
Sterol 14-demethylase-like; Belongs to the cytochrome P450 family.
   
 0.760
CYP51
Obtusifoliol-14-demethylase; Belongs to the cytochrome P450 family.
   
 0.760
LOC107795729
Multifunctional methyltransferase subunit TRM112-like protein At1g22270.
   
 0.678
LOC107806977
Multifunctional methyltransferase subunit TRM112-like protein At1g22270.
   
 0.678
LOC107769866
7-dehydrocholesterol reductase-like.
   
 
 0.633
LOC107801501
7-dehydrocholesterol reductase-like.
   
 
 0.633
LOC107776645
Delta(14)-sterol reductase-like.
   
 
 0.632
LOC107792080
Delta(14)-sterol reductase-like isoform X1.
   
 
 0.632
LOC107767221
Ergosterol biosynthetic protein 28-like.
    
 
 0.583
LOC107819140
Ergosterol biosynthetic protein 28-like.
    
 
 0.583
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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