STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107806486Pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like. (441 aa)    
Predicted Functional Partners:
LOC107790326
4-coumarate--CoA ligase-like 9.
    
 0.709
LOC107801263
Chalcone synthase G-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.707
LOC107809744
Chalcone synthase 2; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.707
LOC107813425
Chalcone synthase J-like isoform X1; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.707
LOC107813613
Chalcone synthase A; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.707
LOC107826422
Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.707
LOC107832236
Chalcone synthase G-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.707
LOC107801774
Chalcone synthase 1B-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.707
LOC107777516
Acylsugar acyltransferase 3-like.
  
  
 
0.704
LOC107800192
Vinorine synthase-like.
  
  
 
0.704
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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