STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107808423Biogenesis of lysosome-related organelles complex 1 subunit 1-like. (133 aa)    
Predicted Functional Partners:
LOC107760212
Biogenesis of lysosome-related organelles complex 1 subunit 2-like.
   
 
 0.929
LOC107781677
Biogenesis of lysosome-related organelles complex 1 subunit 2-like.
   
 
 0.929
LOC107763200
Uncharacterized protein LOC107763200.
   
 
 0.675
LOC107780426
Protein MEF2BNB homolog.
   
 
 0.675
LOC107805385
Uncharacterized protein LOC107805385.
   
 
 0.675
LOC107815420
Uncharacterized protein LOC107815420.
   
 
 0.675
LOC107816789
Uncharacterized protein LOC107816789 isoform X1.
   
 
 0.675
LOC107822227
Uncharacterized protein LOC107822227.
   
 
 0.675
LOC107791617
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
  0.654
LOC107796299
Clathrin heavy chain 2-like.
    
  0.654
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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