STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107809635Ethylene-responsive transcription factor ERF021-like. (180 aa)    
Predicted Functional Partners:
PSBP2
Oxygen-evolving enhancer protein 2-2, chloroplastic; May be involved in the regulation of photosystem II.
  
 
   0.536
LOC107785785
Oxygen-evolving enhancer protein 2-1, chloroplastic.
  
 
   0.529
LOC107830202
Oxygen-evolving enhancer protein 2-3, chloroplastic.
  
 
   0.529
PSBP3
Oxygen-evolving enhancer protein 2-3, chloroplastic; May be involved in the regulation of photosystem II. Belongs to the psbP family.
  
 
   0.529
PSBP1
Oxygen-evolving enhancer protein 2-1, chloroplastic; May be involved in the regulation of photosystem II. Belongs to the psbP family.
  
 
   0.529
LOC107762712
Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like.
  
     0.528
LOC107824784
Dof zinc finger protein DOF2.5-like.
  
     0.527
LOC107822510
Dof zinc finger protein DOF2.4-like.
  
 
  0.526
LOC107769475
Oxygen-evolving enhancer protein 2-1, chloroplastic-like.
  
 
   0.525
LOC107772575
Dof zinc finger protein DOF3.4-like.
  
     0.524
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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