STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107810226Zinc finger CCCH domain-containing protein 45-like. (729 aa)    
Predicted Functional Partners:
LOC107760245
Protein FRIGIDA-ESSENTIAL 1-like.
  
   
 0.568
LOC107826996
Protein FRIGIDA-ESSENTIAL 1-like isoform X1.
  
   
 0.563
LOC107796410
Uncharacterized protein LOC107796410.
  
     0.469
LOC107827505
Uncharacterized protein LOC107827505.
  
     0.460
LOC107779821
acyl-CoA-binding domain-containing protein 4-like.
      
 0.444
LOC107779805
Tip elongation aberrant protein 3-like.
      
 0.444
LOC107801977
acyl-CoA-binding domain-containing protein 4.
      
 0.444
LOC107792646
Uncharacterized protein LOC107792646.
  
     0.442
LOC107766363
tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.
      
 0.440
LOC107782150
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
      
 0.440
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.