LOC107810395 protein (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC107810395

Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (320 aa)

Predicted Functional Partners:

LOC107771118

0.660

LOC107771114

0.660

LOC107779537

0.660

LOC107780227

0.660

LOC107788434

0.660

LOC107789210

0.660

LOC107789497

0.660

LOC107797120

0.660

LOC107798749

0.660

LOC107821171

0.660

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107771114	LOC107810395	A0A1S3Y1E6	A0A1S4BP45	Flavin-dependent oxidoreductase FOX1-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107771118	LOC107810395	A0A1S3Y1C0	A0A1S4BP45	Flavin-dependent oxidoreductase FOX2-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107779537	LOC107810395	A0A1S3YTK9	A0A1S4BP45	Reticuline oxidase-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107780227	LOC107810395	A0A1S3YVS6	A0A1S4BP45	Tetrahydrocannabinolic acid synthase-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107788434	LOC107810395	A0A1S3ZMT1	A0A1S4BP45	Flavin-dependent oxidoreductase FOX1-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107789210	LOC107810395	A0A1S3ZQ17	A0A1S4BP45	Reticuline oxidase-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107789497	LOC107810395	A0A1S3ZR18	A0A1S4BP45	Flavin-dependent oxidoreductase FOX2-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107797120	LOC107810395	A0A1S4AFK8	A0A1S4BP45	Flavin-dependent oxidoreductase FOX2-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107798749	LOC107810395	A0A1S4AKX1	A0A1S4BP45	Flavin-dependent oxidoreductase FOX2-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660
LOC107810395	LOC107771114	A0A1S4BP45	A0A1S3Y1E6	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Flavin-dependent oxidoreductase FOX1-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107771118	A0A1S4BP45	A0A1S3Y1C0	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Flavin-dependent oxidoreductase FOX2-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107779537	A0A1S4BP45	A0A1S3YTK9	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Reticuline oxidase-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107780227	A0A1S4BP45	A0A1S3YVS6	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Tetrahydrocannabinolic acid synthase-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107788434	A0A1S4BP45	A0A1S3ZMT1	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Flavin-dependent oxidoreductase FOX1-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107789210	A0A1S4BP45	A0A1S3ZQ17	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Reticuline oxidase-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107789497	A0A1S4BP45	A0A1S3ZR18	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Flavin-dependent oxidoreductase FOX2-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107797120	A0A1S4BP45	A0A1S4AFK8	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Flavin-dependent oxidoreductase FOX2-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107798749	A0A1S4BP45	A0A1S4AKX1	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Flavin-dependent oxidoreductase FOX2-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107810395	LOC107821171	A0A1S4BP45	A0A1S4CPU8	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Reticuline oxidase-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	0.660
LOC107821171	LOC107810395	A0A1S4CPU8	A0A1S4BP45	Reticuline oxidase-like; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.660

Server load: low (12%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About