STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107810520Uncharacterized mitochondrial protein AtMg00820-like. (129 aa)    
Predicted Functional Partners:
LOC107783574
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.533
LOC107776213
Uncharacterized protein LOC107776213.
  
     0.529
LOC107786462
Uncharacterized protein LOC107786462.
  
     0.528
LOC107796709
Uncharacterized protein LOC107796709.
  
     0.528
LOC107762101
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.518
LOC107831156
Uncharacterized protein LOC107831156.
  
     0.518
LOC107763414
Uncharacterized protein LOC107763414.
  
     0.517
LOC107816345
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.517
LOC107795672
Uncharacterized protein LOC107795672.
  
     0.506
LOC107771436
Uncharacterized protein LOC107771436.
  
     0.504
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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