STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107810688Auxin-responsive protein SAUR68-like. (148 aa)    
Predicted Functional Partners:
LOC107828647
Uncharacterized protein At5g19025-like.
  
     0.481
LOC107798391
Uncharacterized protein At5g19025-like.
  
     0.465
LOC107775207
Scarecrow-like protein 4; Belongs to the GRAS family.
  
     0.456
LOC107777279
Scarecrow-like protein 4; Belongs to the GRAS family.
  
     0.451
LOC107803022
Uncharacterized protein LOC107803022.
  
     0.443
LOC107786219
MFP1 attachment factor 1-like.
  
     0.431
LOC107774958
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.429
LOC107803613
Glycerophosphodiester phosphodiesterase GDPDL3-like.
  
     0.424
LOC107824712
Putative F-box protein PP2-B12.
  
     0.416
LOC107759683
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290.
  
     0.412
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.