STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107811469Putative late blight resistance protein homolog R1B-23; Belongs to the disease resistance NB-LRR family. (443 aa)    
Predicted Functional Partners:
LOC107793649
Uncharacterized protein LOC107793649 isoform X1.
  
 
  0.531
LOC107799373
Heat shock factor protein HSF30-like.
  
     0.531
LOC107830887
Uncharacterized protein LOC107830887.
  
   0.528
LOC107783832
Uncharacterized protein LOC107783832.
  
     0.527
LOC107811313
Uncharacterized protein LOC107811313.
  
   0.527
LOC107774792
Uncharacterized protein LOC107774792.
  
 
  0.526
LOC107769739
F-box protein At3g08750-like.
  
     0.525
LOC107763059
F-box/kelch-repeat protein At3g23880-like.
  
     0.524
LOC107809733
Uncharacterized protein LOC107809733.
  
     0.524
LOC107786486
F-box/kelch-repeat protein At3g23880-like.
  
     0.523
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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