STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107811673Auxin-responsive protein SAUR68-like. (144 aa)    
Predicted Functional Partners:
LOC107775137
Uncharacterized protein LOC107775137 isoform X1.
  
     0.463
LOC107801474
Uncharacterized protein LOC107801474.
  
     0.454
LOC107803022
Uncharacterized protein LOC107803022.
  
     0.447
LOC107783091
Uncharacterized protein LOC107783091.
  
     0.446
LOC107778966
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290.
  
     0.442
LOC107782577
VQ motif-containing protein 25-like.
  
     0.432
LOC107771352
Uncharacterized protein LOC107771352.
  
     0.429
LOC107796869
BURP domain protein RD22-like isoform X1.
  
     0.420
LOC107816355
BURP domain protein RD22-like.
  
     0.420
LOC107778787
Dolichol-phosphate mannosyltransferase subunit 3; Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER. Belongs to the DPM3 family.
  
     0.417
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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