STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107812097Uncharacterized protein LOC107812097. (180 aa)    
Predicted Functional Partners:
LOC107828204
Uncharacterized protein LOC107828204.
  
     0.527
LOC107769848
Uncharacterized protein LOC107769848.
  
     0.525
LOC107799981
Uncharacterized protein LOC107799981.
  
     0.524
LOC107817522
Uncharacterized protein LOC107817522.
  
     0.523
LOC107792482
Uncharacterized protein LOC107792482.
  
     0.521
LOC107811219
Uncharacterized protein LOC107811219.
  
     0.519
LOC107813946
Uncharacterized protein LOC107813946.
  
     0.519
LOC107785843
Uncharacterized protein LOC107785843.
  
     0.517
LOC107776573
Uncharacterized protein LOC107776573.
  
     0.516
LOC107811771
Uncharacterized protein LOC107811771.
  
     0.514
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.