STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107812349Uncharacterized protein At3g03773 isoform X1. (152 aa)    
Predicted Functional Partners:
LOC107771402
Peptidyl-prolyl cis-trans isomerase CYP40-like.
   
 0.882
LOC107779754
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.882
LOC107780505
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.882
LOC107803362
Peptidyl-prolyl cis-trans isomerase CYP40-like.
   
 0.882
LOC107810320
Uncharacterized protein LOC107810320 isoform X1.
   
 0.882
CYP40
Peptidyl-prolyl cis-trans isomerase CYP40-like isoform X1.
   
 0.882
LOC107760880
Uncharacterized protein LOC107760880.
   
 0.840
LOC107762165
Uncharacterized protein LOC107762165.
   
 0.840
LOC107764955
Heat shock cognate protein 80-like.
   
 0.840
LOC107765261
Heat shock protein 82-like.
   
 0.840
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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