STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107812748Uncharacterized protein LOC107812748 isoform X1. (368 aa)    
Predicted Functional Partners:
LOC107768729
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.912
LOC107771175
Anaphase-promoting complex subunit 4-like isoform X1.
    
 0.912
LOC107775835
Anaphase-promoting complex subunit 2-like; Belongs to the cullin family.
    
 0.912
LOC107777012
Anaphase-promoting complex subunit 6-like.
    
 0.912
LOC107784310
Anaphase-promoting complex subunit 11.
    
 0.912
LOC107790682
Anaphase-promoting complex subunit 6-like isoform X1.
    
 0.912
LOC107793737
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.912
LOC107804103
Anaphase-promoting complex subunit 2-like; Belongs to the cullin family.
    
 0.912
LOC107815065
Anaphase-promoting complex subunit 11-like.
    
 0.912
LOC107831050
Anaphase-promoting complex subunit 4-like.
    
 0.912
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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