STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107812917Alcohol dehydrogenase-like 6. (385 aa)    
Predicted Functional Partners:
LOC107758965
Pyruvate decarboxylase 2-like.
     
 0.943
PDC2
Pyruvate decarboxylase 2.
     
 0.943
LOC107777569
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.934
LOC107764230
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.933
LOC107801557
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.933
LOC107823625
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.933
LOC107826075
Pyruvate decarboxylase 1 isoform X1.
     
 0.923
LOC107764314
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.903
LOC107776428
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.903
LOC107783972
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.903
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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