STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107813084LOW QUALITY PROTEIN: disease resistance protein At4g27190-like; Belongs to the disease resistance NB-LRR family. (821 aa)    
Predicted Functional Partners:
LOC107816428
RPM1-interacting protein 4-like isoform X1.
    
 0.761
LOC107804211
Uncharacterized protein LOC107804211; Belongs to the disease resistance NB-LRR family.
      
 0.700
LOC107805143
Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
      
 0.667
LOC107762931
Molybdopterin synthase catalytic subunit-like.
      
 0.663
LOC107786194
RPM1-interacting protein 4-like isoform X1.
    
  0.656
LOC107786685
RPM1-interacting protein 4-like isoform X1.
    
  0.656
LOC107790422
RPM1-interacting protein 4-like.
    
  0.656
LOC107807092
RPM1-interacting protein 4-like isoform X1.
    
  0.656
LOC107811869
RPM1-interacting protein 4-like.
    
  0.656
LOC107798925
RPM1-interacting protein 4-like.
     
  0.650
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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