STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107813262Transcription factor ILR3-like. (176 aa)    
Predicted Functional Partners:
LOC107808852
Uncharacterized protein LOC107808852 isoform X1.
  
     0.495
LOC107832637
Uncharacterized protein LOC107832637.
  
     0.489
LOC107781119
Protein LHCP TRANSLOCATION DEFECT-like.
  
     0.457
LOC107760099
Protein LHCP TRANSLOCATION DEFECT-like.
  
     0.450
LOC107774870
Uncharacterized protein LOC107774870.
  
     0.447
LOC107801106
Uncharacterized protein LOC107801106 isoform X1.
  
     0.440
LOC107766032
Uncharacterized protein LOC107766032.
  
     0.438
LOC107772763
Uncharacterized protein LOC107772763.
  
     0.430
LOC107812265
Uncharacterized protein LOC107812265.
  
 
   0.430
LOC107786812
Uncharacterized protein LOC107786812.
  
     0.428
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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