STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107813493Uncharacterized mitochondrial protein AtMg00810-like. (166 aa)    
Predicted Functional Partners:
LOC107772776
Uncharacterized protein LOC107772776.
  
     0.538
LOC107770383
Uncharacterized protein LOC107770383.
  
     0.501
LOC107777412
Uncharacterized protein LOC107777412.
  
     0.498
LOC107761498
Uncharacterized protein LOC107761498.
  
     0.495
LOC107765430
Uncharacterized mitochondrial protein AtMg00810-like.
  
     0.491
LOC107812042
Uncharacterized protein LOC107812042.
  
     0.485
LOC107819821
Uncharacterized mitochondrial protein AtMg00810-like.
  
     0.483
LOC107797967
Pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like.
  
     0.480
LOC107831263
Uncharacterized mitochondrial protein AtMg00810-like.
  
     0.480
orf152
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.478
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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