STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107815325Uncharacterized protein LOC107815325. (262 aa)    
Predicted Functional Partners:
LOC107814679
F-box only protein 13-like.
  
     0.526
LOC107829569
F-box only protein 13-like.
  
     0.525
LOC107782280
Uncharacterized protein LOC107782280.
  
     0.511
LOC107804332
Uncharacterized protein LOC107804332.
  
     0.510
LOC107810246
Uncharacterized protein LOC107810246.
      
 0.503
LOC107825058
Uncharacterized protein LOC107825058.
      
 0.503
LOC107781807
Uncharacterized protein LOC107781807.
  
     0.501
LOC107810685
Uncharacterized protein LOC107810685.
  
     0.475
LOC107811765
Transcription factor PIF4-like.
  
     0.471
LOC107779893
Uncharacterized protein LOC107779893.
  
     0.468
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.