Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC107817987 | LOC107827598 | A0A1S4CE11 | A0A1S4DA34 | Ribonuclease 2-like isoform X1; Belongs to the RNase T2 family. | Ubiquitin-like protein 5. | 0.439 |
LOC107817987 | cat3 | A0A1S4CE11 | L0SQ48 | Ribonuclease 2-like isoform X1; Belongs to the RNase T2 family. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.533 |
LOC107817987 | pr10 | A0A1S4CE11 | H2ESL0 | Ribonuclease 2-like isoform X1; Belongs to the RNase T2 family. | Pathogenesis-related protein STH-2-like. | 0.627 |
LOC107827598 | LOC107817987 | A0A1S4DA34 | A0A1S4CE11 | Ubiquitin-like protein 5. | Ribonuclease 2-like isoform X1; Belongs to the RNase T2 family. | 0.439 |
cat3 | LOC107817987 | L0SQ48 | A0A1S4CE11 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Ribonuclease 2-like isoform X1; Belongs to the RNase T2 family. | 0.533 |
pr10 | LOC107817987 | H2ESL0 | A0A1S4CE11 | Pathogenesis-related protein STH-2-like. | Ribonuclease 2-like isoform X1; Belongs to the RNase T2 family. | 0.627 |