STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107818944Cytochrome P450 71A1-like; Belongs to the cytochrome P450 family. (234 aa)    
Predicted Functional Partners:
LOC107759647
Bidirectional sugar transporter SWEET; Mediates both low-affinity uptake and efflux of sugar across the membrane; Belongs to the SWEET sugar transporter family.
      
 0.499
LOC107773378
Bidirectional sugar transporter SWEET2a-like; Belongs to the SWEET sugar transporter family.
      
 0.499
LOC107760423
Abscisic acid 8'-hydroxylase 4-like; Belongs to the cytochrome P450 family.
  
  
  0.497
LOC107801839
Cytochrome P450 714C2-like.
  
  
  0.429
LOC107773282
Homoserine kinase-like.
      
 0.414
LOC107789588
Homoserine kinase-like.
      
 0.414
LOC107799325
Tubby-like F-box protein; Belongs to the TUB family.
      
 0.414
LOC107807485
Homoserine kinase-like.
      
 0.414
LOC107811011
Homoserine kinase-like.
      
 0.414
LOC107817337
Tubby-like F-box protein; Belongs to the TUB family.
      
 0.414
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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