STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107819276Uncharacterized protein LOC107819276 isoform X1. (834 aa)    
Predicted Functional Partners:
LOC107762572
Myosin-binding protein 7-like.
  
 
   0.436
LOC107778377
Protein SIEVE ELEMENT OCCLUSION C-like.
  
     0.434
LOC107805282
Protein SIEVE ELEMENT OCCLUSION C-like.
  
     0.434
LOC107825701
Putative pectinesterase/pectinesterase inhibitor 26.
  
 
  0.425
LOC107817864
Myosin-binding protein 7-like.
  
 
   0.421
LOC107764716
Putative pectinesterase/pectinesterase inhibitor 26.
  
 
  0.420
LOC107830539
Myosin-binding protein 7-like.
  
 
   0.419
LOC107807355
Uncharacterized protein LOC107807355.
  
     0.416
LOC107802725
Uncharacterized protein LOC107802725 isoform X1.
  
     0.412
LOC107802266
Uncharacterized protein LOC107802266.
  
     0.410
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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