STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107819216Cold-regulated 413 plasma membrane protein 2-like. (202 aa)    
Predicted Functional Partners:
LOC107830474
Auxin-repressed 12.5 kDa protein-like.
  
   
 0.546
LOC107772308
Peroxidase 27-like.
  
     0.524
LOC107831777
Peroxidase 27-like.
  
     0.520
ARP1
Auxin-repressed 12.5 kDa protein-like.
  
   
 0.520
LOC107769120
Uncharacterized protein LOC107769120.
  
     0.516
LOC107813980
Uncharacterized protein LOC107813980.
  
     0.513
LOC107773505
Auxin-repressed 12.5 kDa protein-like.
  
   
 0.512
LOC107787688
Uncharacterized protein LOC107787688.
  
     0.512
LOC107806065
Uncharacterized protein LOC107806065.
  
     0.509
LOC107819087
Uncharacterized protein LOC107819087.
  
     0.507
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.