STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107819421ABC transporter I family member 6, chloroplastic-like. (320 aa)    
Predicted Functional Partners:
LOC107805931
Protein ABCI7, chloroplastic-like.
  
 
 
 0.778
LOC107812498
Protein ABCI7, chloroplastic-like.
  
 
 
 0.777
LOC107765372
UPF0051 protein ABCI8, chloroplastic-like.
  
 
 
 0.737
LOC107774488
UPF0051 protein ABCI8, chloroplastic-like.
  
 
 
 0.737
LOC107776429
UPF0051 protein ABCI8, chloroplastic-like.
  
 
 
 0.737
LOC107799048
UPF0051 protein ABCI8, chloroplastic-like.
  
 
 
 0.737
LOC107790197
Cysteine desulfurase 1, chloroplastic-like.
  
 
 
 0.614
LOC107793129
Cysteine desulfurase 1, chloroplastic-like.
  
 
 
 0.614
LOC107798851
Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like.
    
 0.597
LOC107800208
Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like.
    
 0.597
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.