STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107821168Protein trichome birefringence-like 14. (536 aa)    
Predicted Functional Partners:
LOC107789386
Uncharacterized protein LOC107789386.
  
     0.518
LOC107760033
Uncharacterized protein LOC107760033.
  
     0.516
LOC107811778
Uncharacterized protein LOC107811778.
  
     0.512
LOC107787254
Auxin-responsive protein SAUR72-like.
  
     0.511
LOC107800030
Uncharacterized protein LOC107800030.
  
     0.510
LOC107775940
Uncharacterized protein LOC107775940.
  
     0.509
LOC107791135
Uncharacterized protein LOC107791135.
  
     0.509
LOC107775823
Uncharacterized protein LOC107775823.
  
     0.508
LOC107828447
Uncharacterized protein LOC107828447.
  
     0.506
LOC107773075
Uncharacterized protein LOC107773075.
  
     0.504
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.