STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107822420Phosphatidylinositol 4-phosphate 5-kinase. (818 aa)    
Predicted Functional Partners:
LOC107812880
Type II inositol polyphosphate 5-phosphatase 15-like isoform X1.
     
 0.904
LOC107796318
Phosphatidylinositol 4-kinase beta 1-like.
   
 0.841
LOC107817063
Phosphatidylinositol 4-kinase beta 1-like; Belongs to the PI3/PI4-kinase family.
   
 0.841
LOC107826316
Phosphatidylinositol 4-kinase beta 1-like; Belongs to the PI3/PI4-kinase family.
   
 0.841
LOC107831790
Phosphatidylinositol 4-kinase beta 1-like.
   
 0.841
LOC107816304
Phosphoinositide phospholipase C.
    
 0.839
LOC107759044
Phosphoinositide phospholipase C.
    
 0.812
LOC107781653
Phosphoinositide phospholipase C.
    
 0.812
LOC107771767
Protein transport protein Sec61 subunit gamma-1.
   
 
 0.781
LOC107797518
Protein transport protein Sec61 subunit gamma-1-like.
   
 
 0.781
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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