STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107822453Proline-rich receptor-like protein kinase PERK8. (86 aa)    
Predicted Functional Partners:
LOC107759599
Uncharacterized protein LOC107759599.
  
  0.530
LOC107783075
Uncharacterized protein LOC107783075.
  
     0.529
LOC107832612
Uncharacterized protein LOC107832612.
  
     0.526
LOC107823430
Uncharacterized protein LOC107823430.
  
     0.525
LOC107776925
Uncharacterized protein LOC107776925.
  
     0.523
LOC107781557
Uncharacterized protein LOC107781557.
  
     0.522
LOC107762606
Abscisic acid receptor PYR1-like.
  
     0.516
LOC107813322
Abscisic acid receptor PYR1-like.
  
     0.516
LOC107773851
Uncharacterized protein LOC107773851.
  
     0.513
LOC107788627
Uncharacterized protein LOC107788627.
  
     0.513
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.