STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1078229121-aminocyclopropane-1-carboxylate oxidase 5-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (317 aa)    
Predicted Functional Partners:
LOC107785978
1-aminocyclopropane-1-carboxylate synthase 7-like.
     
 0.796
LOC107791579
1-aminocyclopropane-1-carboxylate synthase 7-like.
     
 0.796
LOC107810571
1-aminocyclopropane-1-carboxylate synthase 7-like.
     
 0.795
LOC107817443
1-aminocyclopropane-1-carboxylate synthase 7-like.
     
 0.795
LOC107787372
1-aminocyclopropane-1-carboxylate synthase 3-like.
     
 0.794
LOC107829754
1-aminocyclopropane-1-carboxylate synthase 3-like.
     
 0.794
LOC107771295
1-aminocyclopropane-1-carboxylate synthase-like.
     
 0.752
LOC107814996
1-aminocyclopropane-1-carboxylate synthase-like.
     
 0.752
LOC107831434
1-aminocyclopropane-1-carboxylate synthase.
     
 0.752
LOC107771294
1-aminocyclopropane-1-carboxylate synthase-like.
     
 0.733
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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