STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107824527BTB/POZ domain-containing protein At1g03010-like isoform X1; Belongs to the NPH3 family. (629 aa)    
Predicted Functional Partners:
LOC107771053
G-type lectin S-receptor-like serine/threonine-protein kinase RLK1.
  
     0.458
LOC107781817
Probable indole-3-pyruvate monooxygenase YUCCA10.
  
     0.450
LOC107773678
Uncharacterized protein LOC107773678.
  
     0.448
LOC107807476
Uncharacterized protein LOC107807476.
  
     0.431
LOC107759076
Uncharacterized protein LOC107759076.
  
     0.426
LOC107809220
Protein CHUP1, chloroplastic-like.
  
     0.426
LOC107779606
Sialyltransferase-like protein 1; Belongs to the glycosyltransferase 29 family.
      
 0.422
LOC107811803
Sialyltransferase-like protein 1 isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.422
LOC107760529
Mediator of RNA polymerase II transcription subunit 23.
  
     0.420
LOC107759599
Uncharacterized protein LOC107759599.
  
     0.418
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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