STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107824654Uncharacterized protein LOC107824654. (129 aa)    
Predicted Functional Partners:
LOC107770348
Uncharacterized protein LOC107770348; Belongs to the universal ribosomal protein uS5 family.
   
 0.997
LOC107812456
Uncharacterized protein LOC107812456; Belongs to the universal ribosomal protein uS5 family.
   
 0.997
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
 0.995
rps18
Ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.989
LOC107763959
Uncharacterized protein LOC107763959; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.989
LOC107827312
Uncharacterized protein LOC107827312; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.989
LOC107788887
30S ribosomal protein S9, chloroplastic-like; Belongs to the universal ribosomal protein uS9 family.
   
 0.988
LOC107790845
28S ribosomal protein S9, mitochondrial-like; Belongs to the universal ribosomal protein uS9 family.
   
 0.988
LOC107810208
30S ribosomal protein S9, chloroplastic-like; Belongs to the universal ribosomal protein uS9 family.
   
 0.988
LOC107817791
28S ribosomal protein S9, mitochondrial-like; Belongs to the universal ribosomal protein uS9 family.
   
 0.988
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (16%) [HD]