STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107824756Uncharacterized protein LOC107824756. (413 aa)    
Predicted Functional Partners:
LOC107807924
Uncharacterized protein LOC107807924.
  
     0.462
LOC107808585
Uncharacterized protein LOC107808585.
  
     0.450
LOC107762330
Uncharacterized protein LOC107762330.
  
     0.440
LOC107817092
Uncharacterized protein LOC107817092.
  
     0.440
LOC107777742
Uncharacterized protein LOC107777742.
  
     0.439
LOC107786671
Uncharacterized protein LOC107786671.
  
     0.435
LOC107798164
Uncharacterized protein LOC107798164.
  
     0.434
LOC107799258
Uncharacterized protein LOC107799258.
  
     0.421
LOC107789720
Uncharacterized protein LOC107789720 isoform X1.
  
     0.411
LOC107788223
Uncharacterized protein LOC107788223.
  
     0.408
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.