STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107826290Uncharacterized protein LOC107826290. (828 aa)    
Predicted Functional Partners:
LOC107791893
DNA polymerase delta small subunit-like isoform X1.
    
 0.615
LOC107799905
DNA polymerase delta small subunit-like isoform X1.
    
 0.615
LOC107791766
Crossover junction endonuclease MUS81-like.
    
 0.558
LOC107830439
Crossover junction endonuclease MUS81-like.
    
 0.558
LOC107770117
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B.
    
 
 0.530
LOC107770810
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.489
LOC107806389
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.489
LOC107781770
Small nuclear ribonucleoprotein Sm D2.
    
 0.483
LOC107815122
Small nuclear ribonucleoprotein Sm D2.
    
 0.483
LOC107825164
Small nuclear ribonucleoprotein-associated protein.
    
 0.454
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.