STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107827551Acyl-coenzyme A oxidase 4, peroxisomal-like. (290 aa)    
Predicted Functional Partners:
LOC107763455
Electron transfer flavoprotein subunit alpha, mitochondrial-like.
 
 0.944
LOC107814851
Electron transfer flavoprotein subunit alpha, mitochondrial-like.
 
 0.944
LOC107807744
3-ketoacyl-CoA thiolase 2, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.933
LOC107824909
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.933
LOC107781581
Electron transfer flavoprotein subunit beta, mitochondrial-like.
  
 0.932
LOC107785126
Electron transfer flavoprotein subunit beta, mitochondrial-like.
  
 0.932
LOC107769197
3-ketoacyl-CoA thiolase 2, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.930
LOC107770901
3-ketoacyl-CoA thiolase 2, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.930
LOC107797603
acetyl-CoA acetyltransferase, cytosolic 1-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.924
LOC107819057
acetyl-CoA acetyltransferase, cytosolic 1-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.924
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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