STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107828152Glutathione S-transferase zeta class-like; Belongs to the GST superfamily. (223 aa)    
Predicted Functional Partners:
LOC107764203
Homogentisate 1,2-dioxygenase-like isoform X1.
 
 
 0.990
LOC107770720
LOW QUALITY PROTEIN: homogentisate 1,2-dioxygenase-like.
 
 
 0.990
LOC107777843
Fumarylacetoacetase.
  
 
 0.988
LOC107817619
Fumarylacetoacetase.
  
 
 0.988
LOC107759618
Elongation factor 1-beta-like; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.723
LOC107811954
Elongation factor 1-beta-like; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.723
LOC107791787
Elongation factor 1-delta 1-like isoform X1; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.705
LOC107808967
Uncharacterized protein LOC107808967 isoform X1.
   
 0.705
LOC107812526
Elongation factor 1-delta 1-like.
   
 0.705
LOC107812938
Uncharacterized protein LOC107812938.
   
 0.705
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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