STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107828052Uncharacterized protein LOC107828052. (195 aa)    
Predicted Functional Partners:
LOC107764122
Uncharacterized protein LOC107764122.
  
     0.539
LOC107794610
Uncharacterized protein LOC107794610.
  
     0.538
LOC107811078
Uncharacterized protein LOC107811078.
  
     0.538
LOC107760983
Uncharacterized protein LOC107760983.
  
     0.537
LOC107776045
Uncharacterized protein LOC107776045.
  
     0.537
LOC107790614
Uncharacterized protein LOC107790614.
  
     0.536
LOC107785353
Uncharacterized protein LOC107785353.
  
     0.535
LOC107813810
Uncharacterized protein LOC107813810.
  
     0.535
LOC107816716
Uncharacterized protein LOC107816716.
  
     0.535
LOC107781592
Uncharacterized protein LOC107781592.
  
     0.534
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.