STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107828587Probable transcription factor KAN2. (234 aa)    
Predicted Functional Partners:
LOC107771889
Kinesin-like calmodulin-binding protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.527
LOC107778555
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.527
LOC107758976
Serine/threonine-protein phosphatase BSL3-like isoform X1.
    
 0.525
LOC107785858
Serine/threonine-protein phosphatase.
    
 0.525
LOC107800858
Serine/threonine-protein phosphatase.
    
 0.525
LOC107826656
Protein TIME FOR COFFEE-like.
    
 0.460
LOC107785785
Oxygen-evolving enhancer protein 2-1, chloroplastic.
  
   0.432
PSBP1
Oxygen-evolving enhancer protein 2-1, chloroplastic; May be involved in the regulation of photosystem II. Belongs to the psbP family.
  
   0.432
LOC107769475
Oxygen-evolving enhancer protein 2-1, chloroplastic-like.
  
   0.427
LOC107822510
Dof zinc finger protein DOF2.4-like.
  
  0.425
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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