STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107829409Protein RADIALIS-like 1. (94 aa)    
Predicted Functional Partners:
LOC107812169
Uncharacterized protein LOC107812169.
  
 0.495
LOC107779678
Uncharacterized protein LOC107779678 isoform X1.
  
 0.494
LOC107767484
Coiled-coil domain-containing protein 22 homolog isoform X1.
    
 0.490
LOC107783478
Coiled-coil domain-containing protein 22 homolog.
    
 0.490
LOC107760046
Uncharacterized protein LOC107760046.
  
 0.485
LOC107806379
Uncharacterized protein LOC107806379.
  
 0.475
LOC107809907
Uncharacterized protein LOC107809907.
  
 0.474
LOC107785515
Uncharacterized protein LOC107785515.
  
 0.461
LOC107812170
Uncharacterized protein LOC107812170.
  
 0.451
LOC107778597
LOB domain-containing protein 16-like.
  
 
  0.449
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.