STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107829951Vacuolar protein sorting-associated protein 2 homolog 2-like. (91 aa)    
Predicted Functional Partners:
LOC107775708
Vacuolar protein sorting-associated protein 24 homolog 1-like.
   
0.910
LOC107775934
Vacuolar protein sorting-associated protein 24 homolog 1-like isoform X1.
   
0.910
LOC107811106
Vacuolar protein sorting-associated protein 24 homolog 1-like.
   
 0.910
LOC107817238
Vacuolar protein sorting-associated protein 24 homolog 1-like.
   
 0.910
LOC107824460
Vacuolar protein sorting-associated protein 24 homolog 1-like.
   
 0.910
LOC107826633
Vacuolar protein sorting-associated protein 24 homolog 1-like.
   
0.910
LOC107760095
Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.868
LOC107806225
Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.868
LOC107758927
Vacuolar protein sorting-associated protein 20 homolog 2-like isoform X1.
   
 0.860
LOC107793302
Vacuolar protein sorting-associated protein 20 homolog 2-like.
   
 0.860
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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