STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107831369Zinc finger CCCH domain-containing protein 34-like. (548 aa)    
Predicted Functional Partners:
LOC107763766
Protein MODIFIER OF SNC1 11-like.
    
 0.807
LOC107775781
Protein MODIFIER OF SNC1 11-like.
    
 0.807
LOC107788337
THO complex subunit 2 isoform X1.
   
 0.638
LOC107822176
THO complex subunit 2-like.
   
 0.638
LOC107831903
THO complex subunit 2-like.
   
 0.638
LOC107794354
THO complex subunit 5B-like.
    
 0.620
LOC107824388
THO complex subunit 5B.
    
 0.620
LOC107825858
THO complex subunit 5B-like.
    
 0.620
LOC107759125
THO complex subunit 3.
     
 0.570
LOC107784599
THO complex subunit 3-like.
     
 0.570
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.