STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107831595Uncharacterized protein LOC107831595. (297 aa)    
Predicted Functional Partners:
LOC107762126
Uncharacterized protein LOC107762126.
   
   0.890
LOC107766065
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like.
   
   0.748
LOC107769914
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like.
   
   0.748
LOC107826817
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like.
   
   0.748
LOC107821737
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2-like.
   
   0.714
LOC107765168
Uncharacterized protein LOC107765168.
    
   0.668
LOC107797538
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like.
    
   0.664
LOC107770117
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B.
    
   0.657
LOC107773085
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6-like.
   
   0.632
LOC107824967
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6-like.
   
   0.632
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (14%) [HD]