STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107831821Uncharacterized protein LOC107831821. (321 aa)    
Predicted Functional Partners:
LOC107772919
Protein NBR1 homolog.
      
 0.507
LOC107781766
Protein NBR1 homolog.
      
 0.507
LOC107791306
Protein NBR1 homolog.
      
 0.507
LOC107828388
Protein NBR1 homolog.
      
 0.507
LOC107777862
Probable ubiquitin conjugation factor E4.
    
 
 0.470
LOC107827966
Probable ubiquitin conjugation factor E4.
    
 
 0.470
LOC107769069
Endoplasmin homolog.
   
 
 0.401
LOC107794069
Endoplasmin homolog.
   
 
 0.401
LOC107816676
Endoplasmin homolog.
   
 
 0.401
LOC107816677
Endoplasmin homolog.
   
 
 0.401
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.