STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107832204General transcription factor 3C polypeptide 3-like. (791 aa)    
Predicted Functional Partners:
LOC107797408
Uncharacterized protein LOC107797408 isoform X1.
   
 0.952
LOC107811026
Uncharacterized protein LOC107811026 isoform X1.
   
 0.952
LOC107815047
Transcription factor TFIIIB component B'' homolog.
   
 0.952
LOC107759011
General transcription factor 3C polypeptide 5-like.
   
 0.941
LOC107762827
General transcription factor 3C polypeptide 5-like isoform X1.
   
 0.941
LOC107773035
General transcription factor 3C polypeptide 5-like.
   
 0.941
LOC107812000
General transcription factor 3C polypeptide 5-like.
   
 0.941
LOC107812107
General transcription factor 3C polypeptide 5-like.
   
 0.941
LOC107759451
Transcription factor IIIB 60 kDa subunit-like.
    
 0.921
LOC107766432
Transcription factor IIIB 70 kDa subunit-like isoform X1.
    
 0.921
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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