STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000000109RING-type domain-containing protein. (86 aa)    
Predicted Functional Partners:
ENSPMGP00000022577
Ubiquitin-like domain-containing protein.
    
 0.599
ENSPMGP00000022579
Uncharacterized protein.
    
 0.599
ENSPMGP00000021359
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.564
ENSPMGP00000008037
CARD domain-containing protein.
    
  0.561
ENSPMGP00000007564
Interferon induced with helicase C domain 1.
   
 0.560
ENSPMGP00000017118
Caspase a; Belongs to the peptidase C14A family.
   
 0.560
ENSPMGP00000011545
Zinc finger, AN1-type domain 4.
    
 0.549
ENSPMGP00000013042
DEXH (Asp-Glu-X-His) box polypeptide 58.
   
 0.548
ENSPMGP00000005217
Ubiquitin-conjugating enzyme E2T (putative); Belongs to the ubiquitin-conjugating enzyme family.
   
  0.527
ENSPMGP00000008117
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.527
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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