STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000002244RAB4a, member RAS oncogene family. (218 aa)    
Predicted Functional Partners:
ENSPMGP00000024164
C2H2-type domain-containing protein.
    
 0.984
ENSPMGP00000014813
RUN and FYVE domain containing 1.
    
 0.905
ENSPMGP00000000838
Intersectin 2a.
    
 0.887
ENSPMGP00000002292
Uncharacterized protein.
    
 0.887
ENSPMGP00000002296
Uncharacterized protein.
    
 0.887
ENSPMGP00000006528
Ig-like domain-containing protein.
   
 0.848
ENSPMGP00000004866
Si:ch73-335l21.4.
  
 0.842
ENSPMGP00000022759
Im:7152348.
  
 0.842
ENSPMGP00000016880
Intersectin 1 (SH3 domain protein).
    
 0.822
ENSPMGP00000022199
C2 domain-containing protein.
    
 0.822
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.