STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000002375Negative regulator of ubiquitin-like proteins 1. (555 aa)    
Predicted Functional Partners:
ENSPMGP00000023295
Ubiquitin-like domain-containing protein.
    
 0.935
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.935
ENSPMGP00000002105
Proteasome 26S subunit, non-ATPase 4a.
   
 0.922
ENSPMGP00000010514
Proteasome 26S subunit, non-ATPase 4b.
   
 0.922
ENSPMGP00000013867
Ubiquitin-like 7b (bone marrow stromal cell-derived).
    
 0.829
ENSPMGP00000002144
Ubiquilin 4.
    
 0.809
ENSPMGP00000011545
Zinc finger, AN1-type domain 4.
    
 0.809
ENSPMGP00000005506
Proteasome 26S subunit, non-ATPase 5.
     
 0.780
ENSPMGP00000028025
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.758
ENSPMGP00000007791
RAD23 homolog A, nucleotide excision repair protein a.
    
 0.754
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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