Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000003333Neuronal pentraxin IIb. (436 aa)    
Predicted Functional Partners:
ENSPMGP00000006267
Ring finger protein 2.
    
 0.738
RING1
Ring finger protein 1.
    
 0.738
ENSPMGP00000027719
Embryonic ectoderm development.
    
 0.668
ENSPMGP00000029048
Hypocretin (orexin) receptor 2.
      
 0.656
ENSPMGP00000015192
Neuronal pentraxin receptor b.
   
   0.577
ENSPMGP00000007967
Polycomb group ring finger 5a.
    
  0.567
ENSPMGP00000009980
Polycomb group ring finger 1.
    
  0.567
PCGF3
Polycomb group ring finger 3.
    
  0.567
ENSPMGP00000012246
Polycomb group ring finger 6.
    
  0.567
PCGF2
Polycomb group ring finger 2.
    
  0.567
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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