STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000006027Topoisomerase I binding, arginine/serine-rich a. (587 aa)    
Predicted Functional Partners:
ENSPMGP00000025531
Small ubiquitin-related modifier.
    
 0.861
ENSPMGP00000005595
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.851
ENSPMGP00000014568
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.845
ENSPMGP00000012406
Potassium channel tetramerization domain containing 2.
    
 0.814
SUMO3
Small ubiquitin-related modifier.
    
 0.749
ENSPMGP00000015630
Small ubiquitin-related modifier.
    
 0.749
ENSPMGP00000022466
Rad60-SLD domain-containing protein.
    
 0.749
ENSPMGP00000026647
Small ubiquitin-related modifier.
    
 0.749
ENSPMGP00000008075
Rad60-SLD domain-containing protein.
    
 0.739
ENSPMGP00000012439
ULP_PROTEASE domain-containing protein.
   
  
 0.693
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.