STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000006116Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)    
Predicted Functional Partners:
ENSPMGP00000010592
Pinin, desmosome associated protein.
    
 0.997
ENSPMGP00000001769
ARID domain-containing protein.
   
 
 0.990
ENSPMGP00000001784
Translocase of outer mitochondrial membrane 20.
   
 
 0.990
ENSPMGP00000004888
ARID domain-containing protein.
   
 
 0.990
ENSPMGP00000019578
RNA binding protein S1, serine-rich domain.
   
 0.989
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.989
ENSPMGP00000023203
Apoptotic chromatin condensation inducer 1b.
   
 0.983
ENSPMGP00000024625
Apoptotic chromatin condensation inducer 1a.
   
 0.983
ENSPMGP00000024628
SAP domain-containing protein.
   
 0.983
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
   
 0.962
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.