Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSPMGP00000001022 | ENSPMGP00000006749 | Myogenic factor. | Transcription factor 12. | 0.843 |
ENSPMGP00000001022 | ENSPMGP00000024678 | Myogenic factor. | Myogenin. | 0.664 |
ENSPMGP00000002498 | ENSPMGP00000006749 | Myogenic factor. | Transcription factor 12. | 0.843 |
ENSPMGP00000002498 | ENSPMGP00000024678 | Myogenic factor. | Myogenin. | 0.657 |
ENSPMGP00000003394 | ENSPMGP00000006749 | Junction plakoglobin b. | Transcription factor 12. | 0.799 |
ENSPMGP00000003394 | ENSPMGP00000026560 | Junction plakoglobin b. | Uncharacterized protein. | 0.945 |
ENSPMGP00000005996 | ENSPMGP00000006749 | Achaete-scute family bHLH transcription factor 1b. | Transcription factor 12. | 0.808 |
ENSPMGP00000005996 | ENSPMGP00000008725 | Achaete-scute family bHLH transcription factor 1b. | LIM domain only 2 (rhombotin-like 1). | 0.404 |
ENSPMGP00000006749 | ENSPMGP00000001022 | Transcription factor 12. | Myogenic factor. | 0.843 |
ENSPMGP00000006749 | ENSPMGP00000002498 | Transcription factor 12. | Myogenic factor. | 0.843 |
ENSPMGP00000006749 | ENSPMGP00000003394 | Transcription factor 12. | Junction plakoglobin b. | 0.799 |
ENSPMGP00000006749 | ENSPMGP00000005996 | Transcription factor 12. | Achaete-scute family bHLH transcription factor 1b. | 0.808 |
ENSPMGP00000006749 | ENSPMGP00000008725 | Transcription factor 12. | LIM domain only 2 (rhombotin-like 1). | 0.855 |
ENSPMGP00000006749 | ENSPMGP00000011143 | Transcription factor 12. | BHLH domain-containing protein. | 0.886 |
ENSPMGP00000006749 | ENSPMGP00000018482 | Transcription factor 12. | T-cell acute lymphocytic leukemia 1. | 0.913 |
ENSPMGP00000006749 | ENSPMGP00000024678 | Transcription factor 12. | Myogenin. | 0.828 |
ENSPMGP00000006749 | ENSPMGP00000026560 | Transcription factor 12. | Uncharacterized protein. | 0.958 |
ENSPMGP00000006749 | ENSPMGP00000029248 | Transcription factor 12. | Achaete-scute family bHLH transcription factor 1a. | 0.808 |
ENSPMGP00000008725 | ENSPMGP00000005996 | LIM domain only 2 (rhombotin-like 1). | Achaete-scute family bHLH transcription factor 1b. | 0.404 |
ENSPMGP00000008725 | ENSPMGP00000006749 | LIM domain only 2 (rhombotin-like 1). | Transcription factor 12. | 0.855 |
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