STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMGP00000006987RUN and SH3 domain containing 2. (1310 aa)    
Predicted Functional Partners:
ENSPMGP00000000011
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.902
ENSPMGP00000021157
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.902
ENSPMGP00000001742
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
    
 0.868
ENSPMGP00000008028
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 0.862
ENSPMGP00000015347
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.844
ENSPMGP00000022751
Lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase).
  
 
 0.834
ENSPMGP00000000585
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.792
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.787
ENSPMGP00000007521
UbiA prenyltransferase domain containing 1.
    
 0.772
ENSPMGP00000016357
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
 
 0.766
Your Current Organism:
Periophthalmus magnuspinnatus
NCBI taxonomy Id: 409849
Other names: P. magnuspinnatus
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